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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899407.1_cds_XP_016449359.1_43919
CDS Infomation

[gene=LOC107774374] [db_xref=GeneID:107774374] [protein=probable sphingolipid transporter spinster homolog 2 isoform X1] [protein_id=XP_016449359.1] [location=join(18395..18555,19248..19379,19671..19772,20708..20812,20938..21013,21549..21623,21719..21821,21891..21953,22596..22650,22812..22909,23097..23173,23420..23533,23862..23981,24376..24504,28831..28909,29040..29173)] [gbkey=CDS]
Sequence

ATGGAAAAACAAGAACCAGAGCCAAAGCCTTTGGTTGATTCAAATTCAACACCTAAACCT
AACACAAATACAAACACATCATTAGCTGCAGAGACAGGCATGGTTATACCTTCAATTCCA
TCGTCATTACTCCCTCAACCTTCTTGGTTCACTGCCAAAAGGTTACTTGCCGTATTCTGT
GTGATCAACTTATTAAATTATGTGGATCGTGGAACTATTGCGAGCAATGGTGTTAATGGA
AGCCGAAAAACTTGTACGAAAACTGGTACATGTTCTCCTGGCAGCGGAATTCAGGGTGAA
TTTGATTTGAGTAATTTTCAGGATGGCGTCATATCATCTGCTTTCATGGTTGGGCTTCTG
GTGGCATCTCCAATATTTGCCTCATTATCCAAGAGTGTCAATCCATTCAGACTTATTGGA
GTTGGACTGACAGTGTGGACGTTAGCTGTTGCTGGTTGTGGTTTGTCAATTAATTTCTGG
TTGATTGCAACATGCAGAATGTTTGTGGGTGTTGGCGAGGCATCTTTCATAAGCCTTGCT
GCTCCTTTTATTGATGATAATGCCCCTGTTGCTCAGAAAACTGCATGGTTGGGAATATTT
TACATGTGTATACCAGCTGGGATAGCAGTTGGCTATGTATATGGTGGCCTGGTTGGCGAT
CATCTTAACTGGCGTTGGGCCTTTTGGATCGAGGCAATACTGATGCTTCCCTTTGCAGTT
TTAGGTTTATTTATGAAACCATTGCAATTAAAAGGATTCTCTCACACTGGATCGAAAAAA
CCATTGACTTCTCCCCTGACTGCTTGCCCAGATGAAGCTGTTTCAAATTGTAACCATGGT
TTGTTACCATCACAGGAAGATTCCAAGGATGGTTCAAAATGTGCACCTAGTAATTTGAAT
CAGTTGACAAGATTTTGGAAGGATATGAAGGTGCTTCATCTTGAAAAGGTTTATGTCATC
AATGTCCTAGGATACATAGCATATAATTTTGTAATTGGCGCGTATTCCTATTGGGGACCA
AAGGCTGGTTATAACATATACCATATGAAAAATGCAGACATGACGTTTGGAGGTATTACT
ATAGTATGTGGAATATTGGGAACCTTGGCCGGAGGCCTTGTTTTGGATCGAATGAATTCC
ACAATATCCACTGCCTTTAAGCTTCTCTCAGTGGCAACATTTCTTGGAGCAATATTTTGC
TTTGCTGCCTTTTGTTTTAAGAACTTATATGTTTTCATCGCTCTTTTTGCGATTGGAGAA
CTGCTTGTATTTGCAACACAGGGCCCTGTAAATTATGTCTGTCTCCATTGCGTCAAACCA
AGTCTTAGACCACTGTCTATGGCGATGTCTACTGTTTCAATTCACATATTTGGTGATGTA
CCTTCCTCTCCTCTTGTGGGGGTTGTCCAGGACCGCATTGACAATTGGAGAGTCACTGCT
TTGATCTTGACATCAATTCTATTTATAGCCGCTGGAATATGGTTTATAGGCATCTTTCTT
CATAGCGTAGATAGATTTGACGAAGATAGTGAGGATCGAGTAAGTGATGTTGAGAGAGCA
AACTCACCACCATTGCTTGAGAAGAAAAGTACTGAACCGATTGAGGTCTCTGTCGAATCC
TAA

Peptide Sequence

PEP ID

XP_016449359.1
PEP Infomation

PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Nicotiana tabacum]
Sequence

MEKQEPEPKPLVDSNSTPKPNTNTNTSLAAETGMVIPSIPSSLLPQPSWFTAKRLLAVFC
VINLLNYVDRGTIASNGVNGSRKTCTKTGTCSPGSGIQGEFDLSNFQDGVISSAFMVGLL
VASPIFASLSKSVNPFRLIGVGLTVWTLAVAGCGLSINFWLIATCRMFVGVGEASFISLA
APFIDDNAPVAQKTAWLGIFYMCIPAGIAVGYVYGGLVGDHLNWRWAFWIEAILMLPFAV
LGLFMKPLQLKGFSHTGSKKPLTSPLTACPDEAVSNCNHGLLPSQEDSKDGSKCAPSNLN
QLTRFWKDMKVLHLEKVYVINVLGYIAYNFVIGAYSYWGPKAGYNIYHMKNADMTFGGIT
IVCGILGTLAGGLVLDRMNSTISTAFKLLSVATFLGAIFCFAAFCFKNLYVFIALFAIGE
LLVFATQGPVNYVCLHCVKPSLRPLSMAMSTVSIHIFGDVPSSPLVGVVQDRIDNWRVTA
LILTSILFIAAGIWFIGIFLHSVDRFDEDSEDRVSDVERANSPPLLEKKSTEPIEVSVES

Transcript Sequence

Gene sequence data has not been registered.